PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_024662-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family WRKY
Protein Properties Length: 496aa    MW: 55026.3 Da    PI: 5.3104
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_024662-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.17.4e-28234292259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     Dg++WrKYGqK  k +++pr+YYrC  a gCpvkk+v+r+ ed +++++tYeg+Hnh+
  NNU_024662-RA 234 YDGCQWRKYGQKIAKRNPCPRAYYRCMVApGCPVKKQVQRCLEDMSILITTYEGTHNHP 292
                    59*************************999****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-29218294IPR003657WRKY domain
SuperFamilySSF1182901.2E-25228294IPR003657WRKY domain
SMARTSM007742.0E-33233293IPR003657WRKY domain
PfamPF031061.9E-25235292IPR003657WRKY domain
PROSITE profilePS5081126.773235294IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 496 aa     Download sequence    Send to blast
MGKEERMTQI DLSLNLGSQN GKELVEEEAE QVVEELEVDD QEGQENPACG SEERKERREE  60
EKDASAGKFL QENLRTEEME MDRMKEENKL LRKVVEETMK DYRSLQMKLA VVQQNDTRKD  120
PQIFLSLHGD ANTIQGTRDV SEVVHDKNPA PLLPSEAKNG EDEDEELELS LSMQTHAHQH  180
GRDDNTKEEN RGLEPEQNNL VKKESDGITN SSPEPPSKKA RITVRARCPA PTIYDGCQWR  240
KYGQKIAKRN PCPRAYYRCM VAPGCPVKKQ VQRCLEDMSI LITTYEGTHN HPLPTGACTM  300
ASMASAAATF VWPSAVNSGS IINDGRTPIP YCNPHSISPS LHSSTTIKNI IDPRNQSNQI  360
VVDLTNNPQQ QFRLPSSSHS RPELAYPWIP TNPSCKTTAG AIVNGGHDFS AHQSPSFQGM  420
DKRDWKVEEK SLSDNVSAIA SDPKFRAAVA AAITSFISTR DSPTVQSKGS SLILRDGEGG  480
GNSSSNKWLL ESLPSC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-20220296176WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010245108.10.0PREDICTED: probable WRKY transcription factor 9
TrEMBLF6H1R31e-115F6H1R3_VITVI; Putative uncharacterized protein
STRINGVIT_12s0055g00340.t011e-115(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.13e-55WRKY DNA-binding protein 9